1

Insulin-Like Growth Factor 2 Gene for Carcass

Leanness and Uniformity

Yuefu Liu, CCSI, September, 2003

IGF2 gene and its physiological functions

Insulin-like growth factor 2 (IGF2) gene plays an important role in mammalian growth,

influencing foetal cell division and differentiation, and postnatal muscle growth.

It was mapped to the distal tip of chromosome 2. IGF2 is an imprinting gene, paternally

expressed, i.e. only the allele from father is expressed in progeny. This imprinting

inheritance mode of the gene was reported by several studies.

The beneficial effects of growth hormone (GH) on swine carcass are known for a long

time. The GH does not act directly on muscle cells but is instead an intermediate in a

series of hormonal signalling events to increase growth (Meadus, 2000). Altering any one

of these endocrine genes or their respective receptor genes can modify growth. IGF2 is

one of the intermediates in the GH endocrine pathway.

IGF2 gene is a major gene for lean growth and fat composition

Based on its physiological function, IGF2 is considered as a candidate gene for a

quantitative trait locus (QTL) in pigs affecting muscularity. The large effects of IGF2

gene on lean meat content and backfat thickness of swine were detected by several

studies. The evidences from these studies are summarized as follows:

An intercross between wild boar and Large White domestic pigs was used for QTL

mapping by Andersson-Eklund et al. (1998). A quantitative trait locus (QTL) on the short

arm of chromosome 2 with a moderate effect on muscle mass was detected using

conventional Mendelian inheritance model. Jeon et al (1999) reanalyzed the data and

tested the presence of an imprinting effect. An imprinted QTL (paternally expressed) was

detected at the distal tip of SSC2p that has very large effects on lean meat content in ham

and explained 30.6% residual phenotypic variance of F2 population. Large effects on the

area of longissimus dorsi muscle, heart weight and backfat thickness were also detected.

This large effect QTL explains 15.4% of F2 phenotypic variance of Longissimus muscle

area, 14% of heart weight, 10.4% of backfat depth. The results demonstrated that the

paternally expressed QTL locates at the same position as IGF2. This together with the

fact that both the gene and the QTL are imprinted makes IGF2 gene a possible candidate

for the QTL effect. The Large White allele at the IGF2-linked QTL is associated with

larger muscle mass and reduces backfat thickness. Notably, this QTL has no effect on

abdominal fat.

Nezer et al. (1999) studied an intercross between Large White and Pietrain pig breeds,

with 1032 F2 progeny. The QTL mapping based on the experiment detected a highly

significant QTL at the distal end of the short arm of chromosome 2, influencing

muscularity measurement (lean cut %, ham % and loin %) and fat deposition (backfat

2

thickness, backfat % and fat cut %). Sequence analysis (Nezer et al.1999) showed that

IGF2 gene coincides with the position of the detected large-effect QTL at the distal end

of chromosome 2p, and well within the 95% support interval. Nezer (1999) also analyzed

the skeletal muscle and liver cDNA from 10-week-old porcine foetuses and found that

IGF2 is imprinted in these tissues of pigs as well just as Human and mouse. QTL

mapping results of Nezer et al. (1999) based on the F2 data also confirmed that the QTL

at the end of SSC2p is imprinted and paternally expressed. Therefore, IGF2 gene is

regarded as a positional candidate for the QTL at the distal end of SSC2p. Its effects on

muscle mass and fat deposition is major and of the same magnitude as those reported for

the Halothane gene (Ryanodine receptor 1 gene). Two loci jointly explain 50% of the

Pietrain-Large White difference for muscularity and leanness. However, they did not find

any evidence for interaction between the QTL at IGF2 gene and Halothane gene locus. In

sequence analysis, Nezer et al. (1999) found a single nucleotide mutation, G to A

transition in IGF2, which increases lean yield by up to 2.7% (Meadus 2000).

The QTL at IGF2 and FAT1 on chromosome 4 (Andersson et al. 1994) are two QTL with

the greatest effect on body composition and fatness, segregating in the wild boar- Large

White cross. The QTL at IGF2 controls mainly muscle mass whereas FAT1 has major

effects on fat deposition (Jeon et al. 1999). The two QTL loci explain 33.1% of variance

for lean meat content in ham, 31.3% for percentage of lean meat plus bone in back, and

26.2 % for average backfat depth.

According to Sheller et al. (2002), IGF2 explains 25% of the phenotypic variation of

leanness in experimental crosses. However, it does not influence daily gain and meat PH.

Lee et al. (2001) tested the existence of the imprinted QTL at IGF2 based a F2 population

of 512 pigs from cross between Berkshire and Yorkshire breeds. Their hypothesis tests

confirmed that IGF2 gene region is imprinted in pigs and harbours an important QTL for

muscularity and fat deposition. The test reached the genome-wide highly significant

threshold (p<0.01) for average backfat thickness and loin-eye area. The favourable alleles

originated from the Yorkshire breed, when transmitted through sires, reduce average

backfat by 0.1 cm and increase loin-eye area by 1.0 squared centimetre, compared to

Berkshire alleles.

The IGF2 microsatellite was found to be highly polymorphic, with three alleles among

the two wild boars founders and another two alleles among eight Large White founders

(Jeon et al. 1999). This high polymorphism provides a good potential for improving lean

meat content of the swine carcass by selection.

A recent study by Laere et al. (2003) reported that a G to A transition in IGF2 gene is the

causative quantitative trait nucleotide. This single nucleotide regulatory mutation in IGF2

gene adds 3-4% more lean meat to hogs. The link of the mutation with desired phenotype

is 100%, regardless the origin of the pedigree (Buys 2003). It allows selecting carcass

leanness directly on functional nucleotide at DNA level.

Use of IGF2 gene in swine breeding

3

The gene mapping researches consistently indicated the large effect of QTL at IGF2 gene

on muscle mass and carcass leanness. This QTL has important practical implications for the

pig industry because it is imprinted and has large effects on lean meat content.

Use for Uniformity: IGF2 gene is paternally expressed only. The genes from boars

should show the full effect on progeny, regardless of the sows’ genotypes. Besides, this

QTL has a large effect on lean meat content of carcass. Use of homozygous terminal sires

in producing hogs should be able to increase the lean- meat-content uniformity of hogs

because a sire, especially AI sire, can produce a large number of progeny and the Dams’

IGF2 gene will not cause any phenotypic variation in progeny.

Using IGF2 gene to increase the uniformity of pork leanness is not just a theoretical

potential. It was confirmed by actual breeding trials. For example, terminal sires that are

homozygous for the favourable allele at the IGF2 gene were selected in Gentec (Sheller

et al. 2002) and a field trial with these sires was conducted to investigate whether IGF2

gene can be used in commercial selection program in order to increase uniformity of

commercial pigs without influencing meat quality. In this trial the hogs from selected

boars were leaner and more uniform compared to those from unselected boars. Backfat

thickness was reduced by 2.3 mm (0.09 inches). Average lean meat percentage, ham

percentage and loin percentage increased by 1.98%, 0.31% and 0.43%, respectively. The

variations of these traits were reduced by 25% on average. Compared with the average of

plant top 25%, hogs from the selected boars were leaner. The increase was 0.64% for lean

meat percentage, 0.39% for ham percentage and 0.43% for loin percentage, respectively.

The meat quality traits, PH after 24 hours and meat color, were also compared. Hogs

from selected boars and those from unselected boars both had the same PH value (5.77 to

5.78 measured after 24 hours) and Minota lightness (44.57 to 43.08) within the optimal

range. The investigation concluded that the selection of homozygous terminal sires with

the favourable allele at IGF2 gene increased the uniformity and carcass leanness in

market hogs without influencing meat quality.

Improving sow longevity: Sow durability (or lifetime reproduction) is said to be

reducing as a result of the genetic selection for increasing leanness and lowering the fat

deposition. Some studies (e.g. Brisbane and Chesnais 1996; Stalder et al. 2001) reported

the association between backfat and sow longevity that is defined as the lifetime number

of litters produced by a sow. Besides, body fat deposition is necessary to sustain sow

reproduction performance, for example to supply adequate milk production and to limit

body weight loss (Ranford et al. 1994).

The selection for leaner carcass demanded by packing industry and consumers may

conflict with the sow longevity and lead to increase the replacement costs of sows in

swine production. IGF2 gene provides a possibility to resolve this conflict. The

imprinting mechanism of this major gene could be used for producing commercial hogs

with required leanness from fatter dams since only the favourable alleles from

homogenous sires at IGF2 are expressed in progeny. Dams can be fatter.

4

References

Andersson L., Haley C.S., Ellegren H., Knott S.A., Johansson M., Andersson K.,

Andersson-Eklund L., Edfors-Lilja I., Fredholm M., Hansson I., Hakansson J.,

Lundstrom K., 1994. Genetic mapping of quantitative loci for growth and fatness in

pigs. Science 263, 1771-1774.

Andersson-Eklund L., Marklund L., Lundstrom K., Haley C. S., Andersson K., 1998.

Mapping quantititative trait loci for carcass and meat traits in a Wild boar x Large

White intercross. J. Anim. Sci. 76, 694-700.

Brisbane J., Chesnais, J., 1996: Relationship between backfat and sow longevity in

Canadian Yorkshire and Landrace pigs. Proc. NSIF meeting. www.nsif.com.

Jeon J., Carlborg, O., Tornsten, A., Giuffra, E., Amarger, V., 1999: A paternally

expressed QTL affecting skeletal and cardiac muscle mass in pigs maps to the IGF2

locus. Nat Genet 21, 157-158.

Sheller, K., Mitchell B., Buys N., 2002. Marker assisted selection for the IGF2-II

polymorphism increases uniformity of hogs. NSIF proceedings

Van Laere A. S., Nguyen M., Brauschweig M., Nezer C., Collette C., Moreau L.,

Archibald A. L., Haley C. S. Buys N., Tally M. Andersson G., Georges M.,

Andersson L., 2003. A regulatory mutation in IGF2 causes a major QTL effect

on muscle growth in the pig. Nature 425: 832-836.

Lee H. K., J. C. Dekkers, R. L. Fernando and M. F. Rothschild., 2001: Evidence of

paternal imprinted QTL around IGF2 in a Berkshire-Yorkshire Cross. Proc. NSIF

meeting.

Meadus, W. J., 2000. What’s new in swine molecular biology. In: Swine genetics for

2000 and beyond: the new way or the old way, Canmore, Alberta.

Nezer C, Moreau L, Brouwers B, Coppieters W, Detilleux J, Hanset R, Karim L, Kvasz

A, Leroy P, Georges M. 1999. An imprinted QTL with major effect on muscle mass

and fat deposition maps to the IGF2 locus in pigs. Nat Genet. 21:155-6.

Ranford J. L., Revell, D. IK., Mullan B. P., William I. H. Toussaint J. K., 1994: Milk

yield, but not milk composition, may be influenced by body fatness in primiparous

sows. J. Anim. Sci. Abstract. 72, Suppl.1:389.

Stalder K. J., Saxton A. M. Conatser G. E., 2001. Growth and compositional effects on

sow productivity traits in purebred Landrace swine. Internal report, University of

Tennesse.